Protein ZmGATA25 | |
---|---|
Information | |
TF Name: | ZmGATA25 |
Species: | Maize |
TF Family: | C2C2-GATA |
Gene Name(Synonym): | GATA25 |
Uniprot ID: | B7ZZ65 |
ZmGATA25 is a protein in the C2C2-GATA family.
Overview of domains present in v5 transcripts | |
---|---|
PF00320 | |
Zm00001eb293740_T001 | |
Zm00001eb293740_T002 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d038801 | DAPseq | sequence | fimo | position | |
Zm00001d038801 | DAPseq | sequence | fimo | position | |
Zm00001d038801 | ChIPseq | sequence | fimo | position | |
Zm00001d038801 | PChIPseq | sequence | fimo | position |
MEVSAECAGGGSVKKEADLFLVDDLLDLPCDDDDEETVVGDWEGDGSKQAAVLDRGCGAGGEEGAAGNASKNESSAVTAL
DSCSNSISGSGLADGDFSGGLCEPYDQLAELEWLSNYLGEDNFPTEDLKKLQLITGIPPAATAMAPAPAPAAAQAQPAAG
VLPQEAPVLGKARSKRSRVAPCSWASRLVVLPPPSPGSPPSAAISPSESGSGTAALAFPARKPLKPAKKKEAPSPSLPPV
PNNAAAAGAGEGRRCLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKHSNSHRKVLELQRQK
EAHPHHHHQYQPQQALAHVGAGGTLNLMHAPSPLLFDGPAAPLIGDDFLVHSHIGPDFRQLI
MEVSAECAGGGSVKKEADLFLVDDLLDLPCDDDDEETVVGDWEGDGSKQAAVLDRGCGAGGEEGAAGNASKNESSAVTAL
DSCSNSISGSGLADGDFSGGLCEPYDQLAELEWLSNYLGEDNFPTEDLKKLQLITGIPPAATAMAPAPAPAAAQAQPAAG
VLPQEAPVLGKARSKRSRVAPCSWASRLVVLPPPSPGSPPSAAISPSESGSGTAALAFPARKPLKPAKKKEAPSPSLPPV
PNNAAAAGAGEGRRCLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKHSNSHRKVLELQRQK
EAHPHHHHQYQPQQALAHVGAGGTLNLMHAPSPLLFDGPAAPLIGDDFLVHSHIGPDFRQLI
MEVSAECAGGGSVKKEADLFLVDDLLDLPCDDDDEETVVGDWEGDGSKQAAVLDRGCGAGGEEGAAGNASKNESSAVTAL
DSCSNSISGSGLADGDFSGGLCEPYDQLAELEWLSNYLGEDNFPTEDLKKLQLITGIPPAATAMAPAPAPAAAQAQPAAG
VLPQEAPVLGKARSKRSRVAPCSWASRLVVLPPPSPGSPPSAAISPSESGSGTAALAFPARKPLKPAKKKEAPSPSLPPV
PNNAAAAGAGEGRRCLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKHSNSHRKVLELQRQK
EAHPHHHHQYQPQQALAHVGAGGTLNLMHAPSPLLFDGPAAPLIGDDFLVHSHIGPDFRQLI
MEVSAECAGGGSVKKEADLFLVDDLLDLPCDDDDEETVVGDWEGDGSKQAAVLDRGCGAGGEEGAAGNASKNESSAVTAL
DSCSNSISGSGLADGDFSGGLCEPYDQLAELEWLSNYLGEDNFPTEDLKKLQLITGIPPAATAMAPAPAPAAAQAQPAAG
VLPQEAPVLGKARSKRSRVAPCSWASRLVVLPPPSPGSPPSAAISPSESGSGTAALAFPARKPLKPAKKKEAPSPSLPPV
PNNAAAAGAGEGRRCLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKHSNSHRKVLELQRQK
EAHPHHHHQYQPQQALAHVGAGGTLNLMHAPSPLLFDGPAAPLIGDDFLVHSHIGPDFRQLI
MEVSAECAGGGSVKKEADLFLVDDLLDLPCDDDDEETVVGDWEGDGSKQAAVLDRGCGAGGEEGAAGNASKNESSAVTAL
DSCSNSISGSGLADGDFSGGLCEPYDQLAELEWLSNYLGEDNFPTEDLKKLQLITGIPPAATAMAPAPAPAAAQAQPAAG
VLPQEAPVLGKARSKRSRVAPCSWASRLVVLPPPSPGSPPSAAISPSESGSGTAALAFPARKPLKPAKKKEAPSPSLPPV
PNNAAAAGAGEGRRCLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKHSNSHRKVLELQRQK
EAHPHHHHQYQPQQALAHVGAGGTLNLMHAPSPLLFDGPAAPLIGDDFLVHSHIGPDFRQLI
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF00320 |
|
Hover here to show all domains |
GCTGACCTTCCCCCTCCTCGTCGTC...
GCTGACCTTCCCCCTCCTCGTCGTCCTCCACTCCGCCCTCCAACGCCACGGACGCGGGACGCGTCCCAATTAAACCCTTCTCCTTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTATTTCCGCCTGCCACTCTACGCGCGCAGAAAAAAATCAGGACAGAAATAAGCGGAGGCGAGGGAGTGGAGGAAGGGAACAACAGACAAATTCTCTGCGGTGAATGGAGGTTTCGGCCGAGTGCGCGGGCGGCGGGAGTGTGAAGAAGGAGGCGGACCTCTTCCTTGTCGACGACCTACTCGACCTGCCGTGCGACGACGACGACGAGGAGACGGTGGTGGGCGACTGGGAAGGGGACGGGAGTAAGCAGGCTGCGGTGTTGGACCGGGGTTGTGGCGCCGGCGGGGAGGAGGGTGCCGCCGGTAACGCGTCGAAGAACGAATCGTCGGCGGTGACTGCGCTGGACAGCTGCAGCAATTCCATCTCGGGTTCCGGCCTCGCCGACGGGGACTTCTCCGGCGGGCTGTGCGAGCCGTACGACCAACTAGCGGAGCTGGAATGGCTGTCCAACTACCTGGGCGAGGACAACTTTCCCACGGAGGATCTGAAGAAGCTGCAGCTCATCACCGGCATTCCGCCGGCTGCAACCGCGATGGCGCCCGCGCCCGCGCCCGCCGCCGCACAGGCACAGCCGGCCGCTGGCGTGTTGCCACAGGAGGCGCCCGTGCTGGGCAAGGCACGCAGCAAGCGGTCGCGCGTCGCGCCATGCAGCTGGGCCTCCCGCCTGGTCGTGCTCCCGCCACCTAGTCCCGGCTCGCCGCCGTCCGCGGCCATCTCGCCGTCCGAGTCCGGCTCCGGCACCGCGGCGCTGGCGTTCCCGGCCAGGAAGCCGTTGAAGCCTGCGAAGAAGAAGGAGGCGCCGTCGCCGTCGCTGCCGCCGGTGCCAAACAACGCCGCGGCGGCGGGCGCGGGGGAGGGGCGGCGGTGCCTGCACTGCGAGACCGACAAGACGCCTCAGTGGAGGACGGGGCCGCTGGGCCCCAAGACGCTGTGCAACGCGTGCGGCGTGCGGTACAAGTCGGGCCGCCTCGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACCTTCGTGGTGTCGAAGCACTCCAACTCCCACCGGAAGGTGCTGGAGCTGCAGCGCCAGAAGGAGGCGCACCCGCACCACCACCACCAGTACCAGCCGCAGCAGGCCCTCGCCCACGTCGGCGCCGGCGGGACCTTGAACTTGATGCACGCGCCGAGCCCGCTGCTGTTCGACGGGCCGGCGGCGCCGCTCATCGGCGACGACTTCTTGGTCCACAGCCACATAGGGCCGGACTTCCGTCAGCTCATCTAGGGACGCCGTCTGGTCATTTGCTCTCTCTAGAGTCTGATCCAATAGCCCAGGAATAATAATTCAGCGCAACCAAAAACTGATCTTTATTTTCTAGGAGTTTTTCCCTCCAGTTTTTCCTTTGTATTTTCACCAGACTATCTTTTCCGAAATCTTCAATTTTTTTTTTGTTTCTCTCTCGATTTCTCGTGTTTTTTTTTTGCTTGAACCTTTCTTCTCGGACCTTTGAGTTTCTGACACCTTAGAAAATAATTCTAGGGAGTTGTTTTTCTTAGCCTCCCCCACCCCGGCTTTCTTTCTTAGCATGTTTTTGAGATTTGTATAATGCAGAGCTCCTAGAGGAAGAGTAAACAAGCAGGTCTAAAGTTCAGACTTCAAA
MEVSAECAGGGSVKKEADLFLVDDLLDLPCDDDDEETVVGDWEGDGSKQAAVLDRGCGAGGEEGAAGNASKNESSAVTAL
DSCSNSISGSGLADGDFSGGLCEPYDQLAELEWLSNYLGEDNFPTEDLKKLQLITGIPPAATAMAPAPAPAAAQAQPAAG
VLPQEAPVLGKARSKRSRVAPCSWASRLVVLPPPSPGSPPSAAISPSESGSGTAALAFPARKPLKPAKKKEAPSPSLPPV
PNNAAAAGAGEGRRCLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKHSNSHRKVLELQRQK
EAHPHHHHQYQPQQALAHVGAGGTLNLMHAPSPLLFDGPAAPLIGDDFLVHSHIGPDFRQLI
ATGGAGGTTTCGGCCGAGTGCGCGG...
ATGGAGGTTTCGGCCGAGTGCGCGGGCGGCGGGAGTGTGAAGAAGGAGGCGGACCTCTTCCTTGTCGACGACCTACTCGACCTGCCGTGCGACGACGACGACGAGGAGACGGTGGTGGGCGACTGGGAAGGGGACGGGAGTAAGCAGGCTGCGGTGTTGGACCGGGGTTGTGGCGCCGGCGGGGAGGAGGGTGCCGCCGGTAACGCGTCGAAGAACGAATCGTCGGCGGTGACTGCGCTGGACAGCTGCAGCAATTCCATCTCGGGTTCCGGCCTCGCCGACGGGGACTTCTCCGGCGGGCTGTGCGAGCCGTACGACCAACTAGCGGAGCTGGAATGGCTGTCCAACTACCTGGGCGAGGACAACTTTCCCACGGAGGATCTGAAGAAGCTGCAGCTCATCACCGGCATTCCGCCGGCTGCAACCGCGATGGCGCCCGCGCCCGCGCCCGCCGCCGCACAGGCACAGCCGGCCGCTGGCGTGTTGCCACAGGAGGCGCCCGTGCTGGGCAAGGCACGCAGCAAGCGGTCGCGCGTCGCGCCATGCAGCTGGGCCTCCCGCCTGGTCGTGCTCCCGCCACCTAGTCCCGGCTCGCCGCCGTCCGCGGCCATCTCGCCGTCCGAGTCCGGCTCCGGCACCGCGGCGCTGGCGTTCCCGGCCAGGAAGCCGTTGAAGCCTGCGAAGAAGAAGGAGGCGCCGTCGCCGTCGCTGCCGCCGGTGCCAAACAACGCCGCGGCGGCGGGCGCGGGGGAGGGGCGGCGGTGCCTGCACTGCGAGACCGACAAGACGCCTCAGTGGAGGACGGGGCCGCTGGGCCCCAAGACGCTGTGCAACGCGTGCGGCGTGCGGTACAAGTCGGGCCGCCTCGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACCTTCGTGGTGTCGAAGCACTCCAACTCCCACCGGAAGGTGCTGGAGCTGCAGCGCCAGAAGGAGGCGCACCCGCACCACCACCACCAGTACCAGCCGCAGCAGGCCCTCGCCCACGTCGGCGCCGGCGGGACCTTGAACTTGATGCACGCGCCGAGCCCGCTGCTGTTCGACGGGCCGGCGGCGCCGCTCATCGGCGACGACTTCTTGGTCCACAGCCACATAGGGCCGGACTTCCGTCAGCTCATCTAG
MEVSAECAGGGSVKKEADLFLVDDLLDLPCDDDDEETVVGDWEGDGSKQAAVLDRGCGAGGEEGAAGNASKNESSAVTAL
DSCSNSISGSGLADGDFSGGLCEPYDQLAELEWLSNYLGEDNFPTEDLKKLQLITGIPPAATAMAPAPAPAAAQAQPAAG
VLPQEAPVLGKARSKRSRVAPCSWASRLVVLPPPSPGSPPSAAISPSESGSGTAALAFPARKPLKPAKKKEAPSPSLPPV
PNNAAAAGAGEGRRCLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKHSNSHRKVLELQRQK
EAHPHHHHQYQPQQALAHVGAGGTLNLMHAPSPLLFDGPAAPLIGDDFLVHSHIGPDFRQLI
CACGGACGCGGGACGCGTCCCAATT...
CACGGACGCGGGACGCGTCCCAATTAAACCCTTCTCCTTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTATTTCCGCCTGCCACTCTACGCGCGCAGAAAAAAATCAGGACAGAAATAAGCGGAGGCGAGGGAGTGGAGGAAGGGAACAACAGACAAATTCTCTGCGGTGAATGGAGGTTTCGGCCGAGTGCGCGGGCGGCGGGAGTGTGAAGAAGGAGGCGGACCTCTTCCTTGTCGACGACCTACTCGACCTGCCGTGCGACGACGACGACGAGGAGACGGTGGTGGGCGACTGGGAAGGGGACGGGAGTAAGCAGGCTGCGGTGTTGGACCGGGGTTGTGGCGCCGGCGGGGAGGAGGGTGCCGCCGGTAACGCGTCGAAGAACGAATCGTCGGCGGTGACTGCGCTGGACAGCTGCAGCAATTCCATCTCGGGTTCCGGCCTCGCCGACGGGGACTTCTCCGGCGGGCTGTGCGAGCCGTACGACCAACTAGCGGAGCTGGAATGGCTGTCCAACTACCTGGGCGAGGACAACTTTCCCACGGAGGATCTGAAGAAGCTGCAGCTCATCACCGGCATTCCGCCGGCTGCAACCGCGATGGCGCCCGCGCCCGCGCCCGCCGCCGCACAGGCACAGCCGGCCGCTGGCGTGTTGCCACAGGAGGCGCCCGTGCTGGGCAAGGCACGCAGCAAGCGGTCGCGCGTCGCGCCATGCAGCTGGGCCTCCCGCCTGGTCGTGCTCCCGCCACCTAGTCCCGGCTCGCCGCCGTCCGCGGCCATCTCGCCGTCCGAGTCCGGCTCCGGCACCGCGGCGCTGGCGTTCCCGGCCAGGAAGCCGTTGAAGCCTGCGAAGAAGAAGGAGGCGCCGTCGCCGTCGCTGCCGCCGGTGCCAAACAACGCCGCGGCGGCGGGCGCGGGGGAGGGGCGGCGGTGCCTGCACTGCGAGACCGACAAGACGCCTCAGTGGAGGACGGGGCCGCTGGGCCCCAAGACGCTGTGCAACGCGTGCGGCGTGCGGTACAAGTCGGGCCGCCTCGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACCTTCGTGGTGTCGAAGCACTCCAACTCCCACCGGAAGGTGCTGGAGCTGCAGCGCCAGAAGGAGGCGCACCCGCACCACCACCACCAGTACCAGCCGCAGCAGGCCCTCGCCCACGTCGGCGCCGGCGGGACCTTGAACTTGATGCACGCGCCGAGCCCGCTGCTGTTCGACGGGCCGGCGGCGCCGCTCATCGGCGACGACTTCTTGGTCCACAGCCACATAGGGCCGGACTTCCGTCAGCTCATCTAGGGACGCCGTCTGGTCATTTGCTCTCTCTAGAGTCTGATCCAATAGCCCAGGAATAATAATTCAGCGCAACCAAAAACTGATCTTTATTTTCTAGGAGTTTTTCCCTCCAGTTTTTCCTTTGTATTTTCACCAGACTATCTTTTCCGAAATCTTCAATTTTTTTTTTGTTTCTCTCTCGATTTCTCGTGTTTTTTTTTTGCTTGAACCTTTCTTCTCGGACCTTTGAGTTTCTGACACCTTAGAAAATAATTCTAGGGAGTTGTTTTTCTTAGCCTCCCCCACCCCGGCTTTCTTTCTTAGCATGTTTTTGAGATTTGTATAATGCAGAGCTCCTAGAGGAAGAGTAAACAAGCAGGTCTAAAGTTCAGACTTC
MEVSAECAGGGSVKKEADLFLVDDLLDLPCDDDDEETVVGDWEGDGSKQAAAAGVLPQEAPVLGKARSKRSRVAPCSWAS
RLVVLPPPSPGSPPSAAISPSESGSGTAALAFPARKPLKPAKKKEAPSPSLPPVPNNAAAAGAGEGRRCLHCETDKTPQW
RTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKHSNSHRKVLELQRQKEAHPHHHHQYQPQQALAHVGAGGTLN
LMHAPSPLLFDGPAAPLIGDDFLVHSHIGPDFRQLI
GGGAACAACAGACAAATTCTCTGCG...
GGGAACAACAGACAAATTCTCTGCGGTGAATGGAGGTTTCGGCCGAGTGCGCGGGCGGCGGGAGTGTGAAGAAGGAGGCGGACCTCTTCCTTGTCGACGACCTACTCGACCTGCCGTGCGACGACGACGACGAGGAGACGGTGGTGGGCGACTGGGAAGGGGACGGGAGTAAGCAGGCTGCGGCCGCTGGCGTGTTGCCACAGGAGGCGCCCGTGCTGGGCAAGGCACGCAGCAAGCGGTCGCGCGTCGCGCCATGCAGCTGGGCCTCCCGCCTGGTCGTGCTCCCGCCACCTAGTCCCGGCTCGCCGCCGTCCGCGGCCATCTCGCCGTCCGAGTCCGGCTCCGGCACCGCGGCGCTGGCGTTCCCGGCCAGGAAGCCGTTGAAGCCTGCGAAGAAGAAGGAGGCGCCGTCGCCGTCGCTGCCGCCGGTGCCAAACAACGCCGCGGCGGCGGGCGCGGGGGAGGGGCGGCGGTGCCTGCACTGCGAGACCGACAAGACGCCTCAGTGGAGGACGGGGCCGCTGGGCCCCAAGACGCTGTGCAACGCGTGCGGCGTGCGGTACAAGTCGGGCCGCCTCGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACCTTCGTGGTGTCGAAGCACTCCAACTCCCACCGGAAGGTGCTGGAGCTGCAGCGCCAGAAGGAGGCGCACCCGCACCACCACCACCAGTACCAGCCGCAGCAGGCCCTCGCCCACGTCGGCGCCGGCGGGACCTTGAACTTGATGCACGCGCCGAGCCCGCTGCTGTTCGACGGGCCGGCGGCGCCGCTCATCGGCGACGACTTCTTGGTCCACAGCCACATAGGGCCGGACTTCCGTCAGCTCATCTAGGGACGCCGTCTGGTCATTTGCTCTCTCTAGAGTCTGATCCAATAGCCCAGGAATAATAATTCAGCGCAACCAAAAACTGATCTTTATTTTCTAGGAGTTTTTCCCTCCAGTTTTTCCTTTGTATTTTCACCAGACTATCTTTTCCGAAATCTTCAATTTTTTTTTTGTT
MEVSAECAGGGSVKKEADLFLVDDLLDLPCDDDDEETVVGDWEGDGSKQAAVLDRGCGAGGEEGAAGNASKNESSAVTAL
DSCSNSISGSGLADGDFSGGLCEPYDQLAELEWLSNYLGEDNFPTEDLKKLQLITGIPPAATAMAGAGEGRRCLHCETDK
TPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVVSKHSNSHRKVLELQRQKEAHPHHHHQYQPQQALAHVGAG
GTLNLMHAPSPLLFDGPAAPLIGDDFLVHSHIGPDFRQLI
GAGGGAGTGGAGGAAGGGAACAACA...
GAGGGAGTGGAGGAAGGGAACAACAGACAAATTCTCTGCGGTGAATGGAGGTTTCGGCCGAGTGCGCGGGCGGCGGGAGTGTGAAGAAGGAGGCGGACCTCTTCCTTGTCGACGACCTACTCGACCTGCCGTGCGACGACGACGACGAGGAGACGGTGGTGGGCGACTGGGAAGGGGACGGGAGTAAGCAGGCTGCGGTGTTGGACCGGGGTTGTGGCGCCGGCGGGGAGGAGGGTGCCGCCGGTAACGCGTCGAAGAACGAATCGTCGGCGGTGACTGCGCTGGACAGCTGCAGCAATTCCATCTCGGGTTCCGGCCTCGCCGACGGGGACTTCTCCGGCGGGCTGTGCGAGCCGTACGACCAACTAGCGGAGCTGGAATGGCTGTCCAACTACCTGGGCGAGGACAACTTTCCCACGGAGGATCTGAAGAAGCTGCAGCTCATCACCGGCATTCCGCCGGCTGCAACCGCGATGGCGGGCGCGGGGGAGGGGCGGCGGTGCCTGCACTGCGAGACCGACAAGACGCCTCAGTGGAGGACGGGGCCGCTGGGCCCCAAGACGCTGTGCAACGCGTGCGGCGTGCGGTACAAGTCGGGCCGCCTCGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACCTTCGTGGTGTCGAAGCACTCCAACTCCCACCGGAAGGTGCTGGAGCTGCAGCGCCAGAAGGAGGCGCACCCGCACCACCACCACCAGTACCAGCCGCAGCAGGCCCTCGCCCACGTCGGCGCCGGCGGGACCTTGAACTTGATGCACGCGCCGAGCCCGCTGCTGTTCGACGGGCCGGCGGCGCCGCTCATCGGCGACGACTTCTTGGTCCACAGCCACATAGGGCCGGACTTCCGTCAGCTCATCTAGGGACGCCGTCTGGTCATTTGCTCTCTCTAGAGTCTGATCCAATAGCCCAGGAATAATAATTCAGCGCAACCAAAAACTGATCTTTATTTTCTAGGAGTTTTTCCCTCCAGTTTTTCCTTTGTATTTTCACCAGACTATCTTTTCCGAAATCTTCAATTTTTTTTTTGTTTCTCTCTCGATTTCTCGTGTTTTTTTTTTGCTTGAACCTTTCTTCTCGGACCTTTGAGTTTCTGACACCTTAGAAAATAATTCTAGGGAGTTGTTTTTCTTAGCCTCCCCCACCCCG
Copyright © 2023 Grassius.org | Last updated: 2023-06-26